CDS
| Accession Number | TCMCG007C51337 |
| gbkey | CDS |
| Protein Id | XP_033135211.1 |
| Location | join(123322..123440,123514..123772,123897..123998,124090..124172,124265..124381,124456..124558,124636..125053,125118..125317,125488..125604) |
| Gene | LOC103836886 |
| GeneID | 103836886 |
| Organism | Brassica rapa |
Protein
| Length | 505aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_033279320.1 |
| Definition | E3 ubiquitin-protein ligase TRAIP isoform X3 [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | O |
| Description | Anaphase-promoting complex subunit 11 RING-H2 finger |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction |
R00095
[VIEW IN KEGG] |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko04121 [VIEW IN KEGG] |
| KEGG_ko |
ko:K08232
[VIEW IN KEGG] ko:K11985 [VIEW IN KEGG] |
| EC |
1.6.5.4
[VIEW IN KEGG]
[VIEW IN INGREDIENT] 2.3.2.27 [VIEW IN KEGG] [VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00053
[VIEW IN KEGG] ko01100 [VIEW IN KEGG] map00053 [VIEW IN KEGG] map01100 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGCCGGCGAAAACGCGGCGGCGAGTGCTATCTGTTCAATCTGCTACGAAGATCTCAAACCGGCGGCTGAGAATCTTCAATCGATCTCCGCCTGCGGCCACGTCTTTCACGAGCTCTGTTTGCAGCAGTGGTTCGAGTACTGCCCGAGCACGAACAAGCGAAACTGTCCGATCTGCAAGCAGAAGTGTTATCTGAAGGATCCTTTCCGCCTTTACTTTCAATCTTCCGGGAATCAAATCGAATCGCAGAAGGTTGGGGGAATCGAGGAAGATCCGGTGGTGTTGAGAGGTGAAGTGAAGCGGCTCGAAGGGAAGTTGCAGAATCTTTCTTCGGCTCTGGAGGAGCAGAAGAAGGTGAATGTTGAGGTCTCCGATCAGTTGTATCAATGTAAGGAGAAACTGAAGGAGGACAAAGTAAAAAGGGTGGAGGCTATGCAAGAAGTATCAACGAACCAACGCTTACTTAAATTAAAATCAGAGGAATGTGTTCAGCTTACTTCTAAGTGCACTCAGCTACAAGACAGAACTATGGCTCTTGCCAAGGAGCTCGCATCGCTTAAACTAGTTTCGGATTTAAGCTTGGAGGAAGATGATGTGCTGAAGCTAGCCTTGTTGGGGAATAACGCAAAGACAAAAGATACAATAGACACACTTGTCAAGTCCTTGGTTATCCGAAACAGGAGTTACAAGGAGTTGCTAGCCAAGCGCAATCAGCTGGGCAGAGGCGAAGCTCGATCTTCTGAGAAACTTGAAAAAGCTTTGGAAAAGATGGATAAATTAAAGAAGCGAGTGAGGGAACTTGAGATGATAACTGAAGAGAGGGATAACAAAGCAATACGGGACATGATAAAAGCTTCAAAGAATTGCAGTGACAGAGAAGTTTCCAAGCCTGCAACCGAAAGCTTGGATAAAATCTCTAAACCACTTGGTAAGTTGGAGAAGAATGATGGCTTCTCCAATCATGGATCATGCTTTAGTGGAAGAGAAGACTCCTTTTTTGGCATAAGGGAGTCGGTTATCGAGGTAGATGATGATGTTCACGAAGCTACCCTTTCTGGCATCAGACATTCAGATTCTACTATGAAAGATGAGAAGGTTGAGGATAGTAATGTTCAGGAGAGACGTGATGATCCGGTGATCAAGGACATAAAGTTCAACATCAGAGAAGGCTCAACGCCATCAGACTCACCGTGCAACAATGAACTCAATGCAGGTGCTGGAGGCAGTTGGTTGTCAAGTGGAGAAAATCAAAATCTCAGAAGATGGAGCAAACAAGGAGATAGAAACAAATCCCCTCATTCACTAGGAGGTTCTGTCTCAGGCAAGGATGATTTGATCTCTGTTGGGCCTGATGGGAAAGGTGGAAGAATCAAAGTGTTGAGATCTAAACCCCAATTTTCTAACGCCAATGCAAGCTCAGGAAGTGGTAAGAGATTGAGGACTGGAACTAAAACAAGTGGTACCTCCTCTCAAGGGTGTCTGCAGATCGAACACTTTTTTGGAAAACCCAAACGCTAA |
| Protein: MAGENAAASAICSICYEDLKPAAENLQSISACGHVFHELCLQQWFEYCPSTNKRNCPICKQKCYLKDPFRLYFQSSGNQIESQKVGGIEEDPVVLRGEVKRLEGKLQNLSSALEEQKKVNVEVSDQLYQCKEKLKEDKVKRVEAMQEVSTNQRLLKLKSEECVQLTSKCTQLQDRTMALAKELASLKLVSDLSLEEDDVLKLALLGNNAKTKDTIDTLVKSLVIRNRSYKELLAKRNQLGRGEARSSEKLEKALEKMDKLKKRVRELEMITEERDNKAIRDMIKASKNCSDREVSKPATESLDKISKPLGKLEKNDGFSNHGSCFSGREDSFFGIRESVIEVDDDVHEATLSGIRHSDSTMKDEKVEDSNVQERRDDPVIKDIKFNIREGSTPSDSPCNNELNAGAGGSWLSSGENQNLRRWSKQGDRNKSPHSLGGSVSGKDDLISVGPDGKGGRIKVLRSKPQFSNANASSGSGKRLRTGTKTSGTSSQGCLQIEHFFGKPKR |